Basic Statistics
Measure | Value |
---|---|
Filename | SRR2031609_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2032077 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
ACATGGG | 4540 | 0.0 | 25.639528 | 3 |
GTACATG | 4870 | 0.0 | 25.329815 | 1 |
TACATGG | 4800 | 0.0 | 24.68073 | 2 |
GGTATCA | 3650 | 0.0 | 23.096258 | 1 |
GTATCAA | 4975 | 0.0 | 22.49759 | 1 |
TCAACGC | 4880 | 0.0 | 21.614954 | 4 |
CAACGCA | 4925 | 0.0 | 21.417458 | 5 |
ATCAACG | 5025 | 0.0 | 21.368406 | 3 |
AACGCAG | 5065 | 0.0 | 20.91154 | 6 |
CATGGGG | 2475 | 0.0 | 20.733362 | 4 |
TATCAAC | 5470 | 0.0 | 19.570192 | 2 |
GTGTACG | 195 | 1.0095768E-5 | 19.539642 | 1 |
ACGCAGA | 5560 | 0.0 | 19.04887 | 7 |
CGCAGAG | 5540 | 0.0 | 18.947115 | 8 |
GAGTACA | 3735 | 0.0 | 17.852484 | 1 |
TCTATAC | 1145 | 0.0 | 17.842789 | 3 |
GTATAGA | 1015 | 0.0 | 17.361885 | 1 |
CGTACAC | 165 | 0.0014619387 | 17.276953 | 3 |
CACCGTA | 165 | 0.0014650804 | 17.271414 | 9 |
CTAATAC | 1050 | 0.0 | 17.19468 | 3 |