SRR2031473_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2031473_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	680872
Sequences flagged as poor quality	0
Sequence length	101
%GC	40

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA	6540	0.9605329636113689	No Hit
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT	4765	0.6998378549859592	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3472	0.5099343195196748	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2580	0.3789258480301731	No Hit
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT	1960	0.28786614811594546	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1507	0.2213338189850662	No Hit
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC	1428	0.2097310507701888	No Hit
AAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA	980	0.14393307405797273	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	1250	0.0	68.85698	1
GTATCAA	2700	0.0	44.73519	1
TCGCTCG	25	0.0016157923	38.000614	36-37
CGCCCGC	25	0.0016157923	38.000614	66-67
GCCCGCG	25	0.0016157923	38.000614	66-67
GTGACGC	50	0.0016158076	37.997826	6
ATCAACG	3215	0.0	37.37733	3
TCAACGC	3235	0.0	37.146248	4
CAACGCA	3270	0.0	36.74866	5
AACGCAG	3325	0.0	36.140785	6
TATCAAC	3330	0.0	35.94389	2
ACGCAGA	3675	0.0	32.569565	7
CGCAGAG	3725	0.0	32.132393	8
TAGTCGC	30	0.0039508916	31.667183	32-33
TACTGCG	30	0.0039523123	31.664856	24-25
CGTCGCC	30	0.0039523123	31.664856	90-91
CATGGGA	2085	0.0	29.159004	4
GCAGAGT	4140	0.0	28.567205	9
ACATGGG	3445	0.0	28.539732	3
TACATGG	3550	0.0	27.963188	2