FastQCFastQC Report
Sat 31 Dec 2022
SRR1954815.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954815.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences251151
Sequences flagged as poor quality0
Sequence length51
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT14820.5900832566862166No Hit
GAATCTATCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTC8180.32570047501303995No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCG7450.2966342957025853No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGC7110.28309662314703105No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT4260.16961907378429708No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC3080.12263538667972654No Hit
GCTGTCACTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTCTGC2950.1174592177614264No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)