FastQCFastQC Report
Sat 31 Dec 2022
SRR1954792.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954792.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences421227
Sequences flagged as poor quality0
Sequence length51
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT84642.0093678705306166No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCG34810.8263952690592009No Hit
GAATCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTC30650.7276361676720627No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGC26190.6217550157041216No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT15490.3677352116554732No Hit
GCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC13800.32761432671694835No Hit
CTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGCT13080.3105214053230206No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCCGAGAAT9850.23384066073637255No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCC9410.2233949865511945No Hit
GAACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCT9280.2203087646328464No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTC9140.21698514102847158No Hit
GAATGACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCT9030.21437372248217706No Hit
CCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC8900.211287500563829No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTA8400.19941741626249032No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA8360.1984678095183832No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCG6070.1441028234182519No Hit
GAATATGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTC4880.11585202278106578No Hit
GAATAATACGGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGC4510.10706816039807515No Hit
GTGTGAGGGATATCTTTTGGCTTACTTTAATTTGTTTTTCTCTGGGGATAA4410.10469414353780741No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)