FastQCFastQC Report
Sat 31 Dec 2022
SRR1954773.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954773.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences448056
Sequences flagged as poor quality0
Sequence length51
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT36840.8222186512400236No Hit
GAATCTATCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCGTCTTC5470.12208295391647472No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCTCCTGACTTCGTATGCCG5450.121636581141643No Hit
GATACTAAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT4540.10132661988679985No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)