FastQCFastQC Report
Sat 31 Dec 2022
SRR1954732.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954732.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences544670
Sequences flagged as poor quality0
Sequence length51
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT90701.665228486973764No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT15540.2853103714175556No Hit
GAATCTGTCTCTTATACACATCTGACGCTCCTTCAGTCGTATGCCGTCTTC11430.20985183689206308No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCTTCAGTCGTATGCC10280.18873813501753356No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTCCTTCAGTCGTATGCCG10200.1872693557566967No Hit
GCTGTCTCTTATACACATCTGACGCTCCTTCAGTCGTATGCCGTCTTCTGC9530.1749683294471882No Hit
CTGTCTCTTATACACATCTGACGCTCCTTCAGTCGTATGCCGTCTTCTGCT8870.1628509005452843No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCTTCAGTCGTATGC8380.15385462757265866No Hit
CCTGTCTCTTATACACATCTGACGCTCCTTCAGTCGTATGCCGTCTTCTGC7730.1419207960783594No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)