FastQCFastQC Report
Sat 31 Dec 2022
SRR1954720.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954720.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences735568
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT91771.2476072912361604No Hit
GAATCTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGCCGTCTTC78631.0689698301176778No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGC69450.9441683161855872No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGCCG66190.899848824309921No Hit
GCTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGCCGTCTTCTGC21920.2980010005873013No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCCATGAAT21050.28617340612968484No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGCCGTC20040.27244252060992324No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCCATGAATCGTA19250.26170252104496117No Hit
GAACTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGCCGTCTTCT19080.2593913818980706No Hit
CTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGCCGTCTTCTGCT17740.24117416744610964No Hit
GAATGACTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGCCGTCT16620.2259478389489483No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGCC16050.21819872533878581No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT15590.2119450547060231No Hit
GAATATGTCTCTTATACACATCTGACGCGCCATGAATCGTATGCCGTCTTC11970.1627313858134122No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA11450.15566201901115873No Hit
GAATAATACGGCTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGC11270.15321493050268636No Hit
CCTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGCCGTCTTCTGC11020.1498161964631414No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGCCG10820.14709720923150546No Hit
GAATGCTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGCCGTCTT10290.13989189306767016No Hit
GAATCTGTCTCTTATACACATCTGACGCGCCATGAATCGTACTGTCTCTTA10110.13744480455919778No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)