FastQCFastQC Report
Sat 31 Dec 2022
SRR1954715.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954715.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences344766
Sequences flagged as poor quality0
Sequence length51
%GC39

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT36291.0525979940017287No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10600.30745491144718445No Hit
GAATCTATCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCGTCTTC8340.2419032039122187No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCG7100.2059367803089632No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGC7020.20361636588294668No Hit
CTGTCTATTATACACATCTGACGCGTACGAAGTCGTATGCCGTCTTCTGCT4590.1331337776926959No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4130.11979139474310112No Hit
GCTGTCACTTATACACATCTGACGCGTACGAAGTCGTATGCCGTCTTCTGC3660.10615895999025425No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)