FastQCFastQC Report
Sat 31 Dec 2022
SRR1954698.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954698.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1356427
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT139101.0254882865056505No Hit
GAATCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTC84970.6264251596289369No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCG46990.3464248352473078No Hit
GAACTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTCT34870.2570724410528543No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGC23310.17184854031953065No Hit
GCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTCTGC21250.15666158223037435No Hit
CCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTCTGC19850.14634034857754968No Hit
CGTTTCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTT19560.1442023787494646No Hit
CTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTCTGCT19000.14007388528833473No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCT18570.13690379209496714No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCC17240.1270986201247837No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTC16390.12083215683556875No Hit
CGCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTCTG15610.115081755228995No Hit
CGTTCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTTC15550.11463941664387393No Hit
GAATGCTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCTT14270.1052028601612914No Hit
GAATGACTGTCTCTTATACACATCTGACGCCCGTGTATTCGTATGCCGTCT13730.10122181289520188No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)