FastQCFastQC Report
Sat 31 Dec 2022
SRR1954655.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954655.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences241342
Sequences flagged as poor quality0
Sequence length51
%GC38

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT37131.5384806622966578No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT9640.3994331695270612No Hit
GAATCTATCTCTTATACACATCTGACGCCAATGCTGTCGTATGCCGTCTTC5820.24115156085554937No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGCCG4230.1752699488692395No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCCAATGCTGTCGTATGC2890.11974708090593432No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2780.11518923353581224No Hit
CGTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2720.11270313497029114No Hit
CGGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT2620.10855963736108926No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)