FastQCFastQC Report
Sat 31 Dec 2022
SRR1954648.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954648.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences201878
Sequences flagged as poor quality0
Sequence length51
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT33421.6554552749680498No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCG18420.9124322610685662No Hit
GAATCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTC14540.7202369748065663No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGC13450.6662439691298705No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT5960.2952278108560616No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTATGCTCAT5180.25659061413328843No Hit
GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC5080.2516371273739585No Hit
GAATGACTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCT4650.23033713430884No Hit
CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC4530.22439295019764413No Hit
GAACTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCT3680.18228831274334004No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTC3470.17188599054874726No Hit
CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT3460.17139064187281428No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTATGCTCATCGTA3350.1659418064375514No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCG3200.15851157629855656No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCC3110.15405343821515965No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2750.13622088588157202No Hit
GAATATGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTC2190.10848136002932464No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)