FastQCFastQC Report
Sat 31 Dec 2022
SRR1954633.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954633.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences532082
Sequences flagged as poor quality0
Sequence length51
%GC41

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT84821.594115192771039No Hit
GAATCTATCTCTTATACACATCTGACGCACCCGTAATCGTATGCCGTCTTC10150.1907600708161524No Hit
CGTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT7740.14546630030709554No Hit
CGGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT5920.11126104622971647No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)