FastQCFastQC Report
Sat 31 Dec 2022
SRR1954622.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954622.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences421580
Sequences flagged as poor quality0
Sequence length51
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTC60721.4402960292233977No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCG49251.1682242990654206No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT43271.0263769628540254No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGC33950.8053038569192088No Hit
GCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC19990.4741686038237108No Hit
GAACTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCT16100.38189667441529485No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTC14120.3349304995493145No Hit
GAATGACTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCT13530.3209355282508658No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTTTACCTT12790.30338251340196404No Hit
CTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGCT12390.29389439726742256No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTTTACCTTCGTA9870.23411926561981117No Hit
CCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC9350.22178471464490726No Hit
GAATATGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTC9260.2196498885146354No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCG8720.20684093173300439No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT7990.1895251197874662No Hit
GAATGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTT7270.17244651074529152No Hit
GAATAATACGGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGC5920.14042411879121403No Hit
TCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC5650.13401964040039852No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)