FastQCFastQC Report
Sat 31 Dec 2022
SRR1954621.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954621.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences161846
Sequences flagged as poor quality0
Sequence length51
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATCTATCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTC13130.81126502971961No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT12110.7482421561237226No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCG10260.6339359638174561No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGC7850.48502897816442797No Hit
GAATCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTC3670.2267587706832421No Hit
GAACTGACTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCT3430.2119298592489156No Hit
GCTGTCACTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC3360.20760476008057044No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT3280.20266178960246162No Hit
GAATGAACTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTC3080.19030436340718956No Hit
GAATGAATGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCT3050.18845074947789875No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGCCG3000.18536139292908074No Hit
CTGTCTATTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGCT2740.16929673887522706No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTTACCTTCGTATGC2450.1513784708920826No Hit
CCTGTCACTTATACACATCTGACGCCTTTACCTTCGTATGCCGTCTTCTGC1740.10750960789886682No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)