FastQCFastQC Report
Sat 31 Dec 2022
SRR1954620.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954620.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences314675
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT41521.3194565821879718No Hit
GAATCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTC13490.42869627393342336No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCG10890.3460713434495909No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGC8460.26884881226662427No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT7300.23198538174306824No Hit
CCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGC4830.15349169778342736No Hit
GCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGC4710.1496782394534043No Hit
CTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCTGCT4280.13601334710415508No Hit
GAACTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCCGTCTTCT3990.12679748947326605No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTACATCATCGTATGCC3720.11821720823071422No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)