FastQCFastQC Report
Sat 31 Dec 2022
SRR1954595.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954595.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences114180
Sequences flagged as poor quality0
Sequence length51
%GC40

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT6370.557891049220529No Hit
GAATCTATCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTC2590.22683482221054477No Hit
GAATGAAACGGCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGC2280.19968470835522856No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCAGCAAGCGTCGTATGCCG2190.19180241723594324No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1830.1602732527588019No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1660.14538448064459625No Hit
GCTGTCACTTATACACATCTGACGCAGCAAGCGTCGTATGCCGTCTTCTGC1150.10071816430197933No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)