FastQCFastQC Report
Sat 31 Dec 2022
SRR1954569.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954569.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences439996
Sequences flagged as poor quality0
Sequence length51
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT69161.5718324712042837No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCG26010.5911417376521605No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGC18460.4195492686297148No Hit
GAATCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTC16040.36454876862516933No Hit
GAATGATACGGCGACCACCGATGAATGATACGGCGAACCCCCGTCGAATGC10560.2400021818380167No Hit
GCTGTCTCTTATACACATCTGACGCAATCGCTGTCGTATGCCGTCTTCTGC5080.1154555950508641TruSeq Adapter, Index 13 (95% over 21bp)

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)