FastQCFastQC Report
Sat 31 Dec 2022
SRR1954564.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954564.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences386157
Sequences flagged as poor quality0
Sequence length51
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT39421.020828315944033No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAACGTTGCTCGTATGCCG13260.34338364965545104No Hit
GAATCTGTCTCTTATACACATCTGACGCAACGTTGCTCGTATGCCGTCTTC9000.23306582555799846No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAACGTTGCTCGTATGC7530.19499840738352536No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC4910.12715035594330804No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)