FastQCFastQC Report
Sat 31 Dec 2022
SRR1954545.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954545.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences184400
Sequences flagged as poor quality0
Sequence length51
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT21931.1892624728850325No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC5100.27657266811279824No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCG4710.2554229934924078No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGC3260.17678958785249457No Hit
GAATCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTC2880.1561822125813449No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)