FastQCFastQC Report
Sat 31 Dec 2022
SRR1954524.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954524.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences935501
Sequences flagged as poor quality0
Sequence length51
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT117401.254942538810755No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCG37000.3955099994548376No Hit
GAATCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTC22320.2385887348062696No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGC20200.21592708078345185No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC17600.18813448622716597No Hit
GCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGC13340.14259738899263602No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)