FastQCFastQC Report
Sat 31 Dec 2022
SRR1954512.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954512.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences969627
Sequences flagged as poor quality0
Sequence length51
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT124801.2870928717950305No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCG50510.5209219627753765No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGC33430.3447717524367618No Hit
GAATCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTC29330.3024874513601622No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC21190.21853764385686456No Hit
GCTGTCTCTTATACACATCTGACGCTTAGCGGTTCGTATGCCGTCTTCTGC12600.12994687647930597No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)