FastQCFastQC Report
Sat 31 Dec 2022
SRR1954502.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954502.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences391171
Sequences flagged as poor quality0
Sequence length51
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT47861.223505832487582No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCG7150.1827845111217345No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC5690.145460680878695No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGC3960.10123449846742218No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)