FastQCFastQC Report
Sat 31 Dec 2022
SRR1954500.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954500.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences202648
Sequences flagged as poor quality0
Sequence length51
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT21631.0673680470569658No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCG4300.21219059650230943No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC4240.20922979748134699No Hit
GAATCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGCCGTCTTC3150.15544194860052898No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCCATGGTCGTATGC2920.1440922190201729No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)