FastQCFastQC Report
Sat 31 Dec 2022
SRR1954494.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954494.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences344507
Sequences flagged as poor quality0
Sequence length51
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT58791.7064965298237773No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGATATCGCTCGTATGCCG19270.559350027720772No Hit
GAATCTGTCTCTTATACACATCTGACGCGATATCGCTCGTATGCCGTCTTC12590.3654497586406082No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGATATCGCTCGTATGC10930.3172649612344597No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC8870.25746936927261277No Hit
GAATGACTGTCTCTTATACACATCTGACGCGATATCGCTCGTATGCCGTCT3560.10333607154571606No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)