FastQCFastQC Report
Sat 31 Dec 2022
SRR1954493.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954493.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences241814
Sequences flagged as poor quality0
Sequence length51
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT28831.1922386627738675No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCG12390.5123772817123905No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGC9540.3945181006889593No Hit
GAATCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTC7950.32876508390746606No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC5420.22413921443754292No Hit
GCTGTCTCTTATACACATCTGACGCTGGCATCATCGTATGCCGTCTTCTGC2460.10173108256759328No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)