FastQCFastQC Report
Sat 31 Dec 2022
SRR1954491.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954491.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences246823
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT28051.1364419037123767No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGCCG10540.4270266547282871No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGC9040.3662543604121172No Hit
GAATCTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGCCGTCTTC7530.30507691746717286No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC6650.2694238381350198No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)