FastQCFastQC Report
Sat 31 Dec 2022
SRR1954471.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954471.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences347000
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT43231.245821325648415No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCG14650.42219020172910665No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGC10030.2890489913544669No Hit
GAATCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTC9830.2832853025936599No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC6530.18818443804034582No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT5450.15706051873198848No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)