FastQCFastQC Report
Sat 31 Dec 2022
SRR1954470.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954470.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences440523
Sequences flagged as poor quality0
Sequence length51
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT63391.4389714044442627No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCG9470.21497174948867598No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC6990.15867502945362671No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGC6840.1552699859031197No Hit
GAATCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTC5650.12825664040243073No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)