FastQCFastQC Report
Sat 31 Dec 2022
SRR1954468.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954468.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1143442
Sequences flagged as poor quality0
Sequence length51
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT79110.6918584414425918No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCG36250.31702526232200673No Hit
GAATCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCTTC32040.28020660427026467No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGC19980.17473557906741224No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)