FastQCFastQC Report
Sat 31 Dec 2022
SRR1954465.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954465.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences384527
Sequences flagged as poor quality0
Sequence length51
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT27680.7198454204776258No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCG6060.15759621561034726No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC5490.14277280919155222No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGC4290.11156563778356265No Hit
GAATCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTC3910.10168336683769931No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)