FastQCFastQC Report
Sat 31 Dec 2022
SRR1954464.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954464.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences690054
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT44700.6477753914911007No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCG22470.32562669008512374No Hit
GAATCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTC15300.22172177829561165No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGC13780.19969451666101493No Hit
GCTGTCTCTTATACACATCTGACGCCGGTTTGTTCGTATGCCGTCTTCTGC6930.10042692311036529No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)