FastQCFastQC Report
Sat 31 Dec 2022
SRR1954462.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954462.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences459823
Sequences flagged as poor quality0
Sequence length51
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT52961.1517475202414842No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGCCG10790.23465550875010605No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC7630.16593341350911112No Hit
GAATCTGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGCCGTCTTC6730.14636066486452395No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCTCGTTTGTCGTATGC6720.1461431898795841No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT5090.11069476733438735No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)