FastQCFastQC Report
Sat 31 Dec 2022
SRR1954460.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954460.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences181258
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT19411.0708492866521753No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCG9770.5390106919418729No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGC7510.4143265400699555No Hit
GAATCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTC6720.37074225689348883No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC6710.370190557106445No Hit
GCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGC2430.13406304825166337No Hit
GAACTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCT1840.10151276081607433No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)