FastQCFastQC Report
Sat 31 Dec 2022
SRR1954449.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954449.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences274608
Sequences flagged as poor quality0
Sequence length51
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT24720.9001922740779584No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC8270.3011565577113558No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCG6110.22249898036473809No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGC4200.15294528928509002No Hit
GAATCTGTCTCTTATACACATCTGACGCCATCATCCTCGTATGCCGTCTTC4070.1482112684262658No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)