FastQCFastQC Report
Sat 31 Dec 2022
SRR1954422.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954422.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences319744
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATGATACCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCG29180.9126050840672538No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT26470.8278497798238591No Hit
GAATCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTC20410.6383231585268214No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGC17460.5460618494795837No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC5710.17858036429143315No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTC5360.16763410728582867No Hit
GAATGACTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCT5240.1638811048839071No Hit
GAACTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCT4980.15574959967974378No Hit
GCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGC4410.1379228382706165No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTA3750.11728132506004804No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)