FastQCFastQC Report
Sat 31 Dec 2022
SRR1954421.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954421.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences244668
Sequences flagged as poor quality0
Sequence length51
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATGATACCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCG27061.1059885232233067No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20550.8399136789445288No Hit
GAATCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTC17050.6968626873967989No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGC16960.6931842333284287No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC6580.26893586410973236No Hit
GAATGACTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCT4600.188009874605588No Hit
GAACTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCT4510.18433142053721777No Hit
GCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGC4410.18024424935013977No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTC4050.165530433076659No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCACGTGAATCGTA3740.1528602023967172No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)