FastQCFastQC Report
Sat 31 Dec 2022
SRR1954416.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954416.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences492176
Sequences flagged as poor quality0
Sequence length51
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT49771.0112236273203081No Hit
GAATCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTC34920.7095022918630733No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCG34570.7023910145964045No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGC23660.48072234322681323No Hit
GAACTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCT10420.21171288319625498No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC8300.16863886089528948No Hit
GAATGATCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTC7730.1570576379181431No Hit
GAATGACTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCT6270.12739345274861025No Hit
GCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGC5350.10870095250479503No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)