FastQCFastQC Report
Sat 31 Dec 2022
SRR1954415.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954415.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences461950
Sequences flagged as poor quality0
Sequence length51
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT46621.0092001298841866No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGCCG27580.5970343110726268No Hit
GAATCTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGCCGTCTTC25900.5606667388245481No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGC23550.5097954324061046No Hit
GAACTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGCCGTCTTCT8310.17988959844138977No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGCCGTC5690.12317350362593354No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC5540.11992639896092651No Hit
GCTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGCCGTCTTCTGC5050.10931919038857019No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCCATGAATCGTA4950.10715445394523215No Hit
GAATGACTGTCTCTTATACACATCTGACGCGCCATGAATCGTATGCCGTCT4740.10260850741422231No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)