FastQCFastQC Report
Sat 31 Dec 2022
SRR1954414.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954414.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences343822
Sequences flagged as poor quality0
Sequence length51
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT34190.9944098981449703No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCG17840.5188731378445823No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGC14080.409514225384065No Hit
GAATCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTCTTC13080.3804294082403104No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC6870.19981269377759422No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT4710.13698948874708425No Hit
GCTGTCTCTTATACACATCTGACGCTGCATTCGTCGTATGCCGTCTTCTGC3450.10034261914595344No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)