FastQCFastQC Report
Sat 31 Dec 2022
SRR1954412.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954412.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences300623
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT26870.8938105201531485No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCG20390.6782581505739748No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGC15050.5006270311985443No Hit
GAATCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTC14630.48665604428137565No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC8140.2707710321565549No Hit
GAACTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCT4010.1333896608043962No Hit
GAATGACTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCT3470.11542696333946503No Hit
GCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTTCTGC3390.11276582297429007No Hit
GAATGATCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTC3220.10711089969829321No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCATACCGCATCGTA3160.10511504442441197No Hit
GAATGCTGTCTCTTATACACATCTGACGCATACCGCATCGTATGCCGTCTT3040.1011233338766495No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)