FastQCFastQC Report
Sat 31 Dec 2022
SRR1954395.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954395.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences320981
Sequences flagged as poor quality0
Sequence length51
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT25820.8044089837093161No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCG15460.48164844648125593No Hit
GAATCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTC10890.3392724179935884No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGC9140.284752056975335No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC8390.26138618796751206No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)