FastQCFastQC Report
Sat 31 Dec 2022
SRR1954387.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954387.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences431955
Sequences flagged as poor quality0
Sequence length51
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT192994.467826509705873No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC18910.4377770832609878No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCG12970.3002627588521952No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGC9800.226875484714843No Hit
GAATCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTC9590.2220138671852392No Hit
CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC6140.14214443634174856No Hit
GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC5780.1338102348624278No Hit
CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT4440.10278848491162274No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA4370.10116794573508815No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)