FastQCFastQC Report
Sat 31 Dec 2022
SRR1954384.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954384.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences870115
Sequences flagged as poor quality0
Sequence length51
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT490495.637070961884349No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCG87021.0000976882366124No Hit
GAATCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTC66600.765416065692466No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGC42370.48694712767852527No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC26710.3069709176373238No Hit
GAACTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCT20930.2405429167408906No Hit
GCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC18570.2134200651638002No Hit
GAATGACTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCT17540.2015825494331209No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTC17110.1966406739339053No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGGAATATT11520.13239629244410223No Hit
CTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGCT9520.10941082500589003No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)