FastQCFastQC Report
Sat 31 Dec 2022
SRR1954383.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954383.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1098196
Sequences flagged as poor quality0
Sequence length51
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT699926.373361403611012No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCG73900.6729217735267657No Hit
GAATCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTC62090.5653817715599037No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGC51600.46986148192126No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC27040.24622198587501684No Hit
GCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCTGC19750.17984039278962954No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTC17150.15616520184010868No Hit
GAACTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCTTCT15860.14441866479207718No Hit
GAATGACTGTCTCTTATACACATCTGACGCGACACAAATCGTATGCCGTCT14470.13176154347675642No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)