FastQCFastQC Report
Sat 31 Dec 2022
SRR1954374.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954374.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences652412
Sequences flagged as poor quality0
Sequence length51
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT158362.427300540149476No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCG18120.27773860689257707No Hit
GAATCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGCCGTCTTC16270.24938229217120472No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCAGCAAGATCGTATGC11590.1776484797949762No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC10940.16768545029827778No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)