FastQCFastQC Report
Sat 31 Dec 2022
SRR1954367.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954367.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1139667
Sequences flagged as poor quality0
Sequence length51
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT248062.1766007088035364No Hit
GAATCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCGTCTTC25780.22620642696506962No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGCCG25650.22506574288805414No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC20700.18163200303246474No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCTAATGACTCGTATGC13370.11731497007459196No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)