FastQCFastQC Report
Sat 31 Dec 2022
SRR1954365.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954365.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1900532
Sequences flagged as poor quality0
Sequence length51
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT706513.717432803025679No Hit
GAATCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTC136840.7200089238171207No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCG136150.7163783614272214No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGC94800.49880770226441856No Hit
GAACTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTCT42510.22367421332553203No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC37400.1967870049017854No Hit
GCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTTCTGC34440.18121241841757993No Hit
GAATGACTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCT31330.16484857923991808No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTC28330.14906352537079093No Hit
GAATGCTGTCTCTTATACACATCTGACGCGTCGTTGATCGTATGCCGTCTT24200.12733276787762585No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)