FastQCFastQC Report
Sat 31 Dec 2022
SRR1954353.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954353.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences992290
Sequences flagged as poor quality0
Sequence length51
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT329323.3187878543570934No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCG26960.27169476665087827No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC26720.26927611887653813No Hit
GAATCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGCCGTCTTC25620.25819064991081236No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGTACAGTCGTATGC13430.1353434983724516No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)