FastQCFastQC Report
Sat 31 Dec 2022
SRR1954347.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954347.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences686069
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT16010.23335845228395397No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC14500.2113490042546741No Hit
GAGCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCT10690.15581523141258385No Hit
CTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGCT9660.14080216421380357No Hit
GCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC8750.12753819222264814No Hit
CCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC7090.10334237518383718No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)