FastQCFastQC Report
Sat 31 Dec 2022
SRR1954255.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1954255.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences406216
Sequences flagged as poor quality0
Sequence length51
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTCT10330.25429820588061525No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT9920.24420505346909033No Hit
AAGCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTCT8780.21614116627606986No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC8210.20210922267955966No Hit
GCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTCTGC7380.18167674340744824No Hit
AAGAGCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTT6470.1592748685428442No Hit
GAGAGCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTT6450.15878251964472104No Hit
CTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTTCTGCT5660.13933473816885597No Hit
TAGAGCTGTCTCTTATACACATCTGACGCCTGCCTAATCGTATGCCGTCTT5300.13047245800263899No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)